Package index
-
abundance_multiGroup
- abundance_multiGroup
-
abundance_twoGroup
- abundance_twoGroup
-
as_summarized_experiment()
- as_summarized_experiment
-
boxPlot_feature_multiGroup()
- boxPlot_feature_multiGroup
-
boxPlot_feature_twoGroup()
- boxPlot_feature_twoGroup
-
char_2wayAnova()
- char_2wayAnova
-
char_association()
- char_association
-
condition_table
- condition_table
-
convert_sp2char()
- convert_sp2char
-
convert_sp2ratio()
- convert_sp2ratio
-
corr_abundance
- corr_abundance
-
corr_cor_heatmap()
- corr_cor_heatmap
-
corr_data
- corr_data
-
corr_group_info
- corr_group_info
-
corr_lr_heatmap()
- corr_lr_heatmap
-
cross_sample_variability()
- cross_sample_variability
-
data_process()
- data_process
-
deChar_multiGroup()
- deChar_multiGroup
-
deChar_twoGroup()
- deChar_twoGroup
-
deSp_multiGroup()
- deSp_multiGroup
-
deSp_twoGroup()
- deSp_twoGroup
-
de_data_twoGroup
- de_data_twoGroup
-
dr_pca()
- dr_pca
-
dr_plsda()
- dr_plsda
-
dr_tsne()
- dr_tsne
-
dr_umap()
- dr_umap
-
enrichment_lsea()
- enrichment_lsea
-
enrichment_ora()
- enrichment_ora
-
extract_summarized_experiment()
- extract_summarized_experiment
-
group_info_multiGroup
- group_info_multiGroup
-
group_info_twoGroup
- group_info_twoGroup
-
heatmap_chain_db()
- heatmap_chain_db
-
heatmap_clustering()
- heatmap_clustering
-
heatmap_correlation()
- heatmap_correlation
-
lipidChar
- lipidChar
-
lipid_annotation()
- lipid_annotation
-
lipid_profiling()
- lipid_profiling
-
list_lipid_char()
- list_lipid_char
-
ml_abundance
- ml_abundance
-
ml_corr_network()
- ml_corr_network
-
ml_data
- ml_data
-
ml_model()
- ml_model
-
ml_se
- ml_se
-
ml_se_sub
- ml_se_sub
-
ml_shap()
- ml_shap
-
ml_sub
- ml_sub
-
nw_gatom()
- nw_gatom
-
nw_lipid_reaction()
- nw_lipid_reaction
-
nw_pathway_activity()
- nw_pathway_activity
-
plot_data_process()
- plot_data_process
-
plot_deChar_multiGroup()
- plot_deChar_multiGroup
-
plot_deChar_twoGroup()
- plot_deChar_twoGroup
-
plot_deSp_multiGroup()
- plot_deSp_multiGroup
-
plot_deSp_twoGroup()
- plot_deSp_twoGroup
-
plot_enrichment_lsea()
- plot_enrichment_lsea
-
plot_ml_evaluation()
- plot_ml_evaluation
-
plot_ml_feature()
- plot_ml_feature
-
plot_ml_pr()
- plot_ml_pr
-
plot_ml_probability()
- plot_ml_probability
-
plot_ml_roc()
- plot_ml_roc
-
plot_ml_shap()
- plot_ml_shap
-
plot_shap_dependence()
- plot_shap_dependence
-
plot_shap_force()
- plot_shap_force
-
plot_shap_sample()
- plot_shap_sample
-
plot_subChar_multiGroup()
- plot_subChar_multiGroup
-
plot_subChar_twoGroup()
- plot_subChar_twoGroup
-
profiling_data
- profiling_data
-
se_multiGroup
- se_multiGroup
-
subChar_multiGroup()
- subChar_multiGroup
-
subChar_twoGroup()
- subChar_twoGroup